OneLab is a browser-based interface to design and execute protocols,
or start from open source methods. Learn more about OneLab softwareUse OneLab
or start from open source methods. Learn more about OneLab softwareUse OneLab
Automated Protein Digestion in Food Matrix
This basic method provides the core methodology for translating a workflow into OneLab-executable script(s) as an attempt to fully or semi-automate a specific procedure. It demonstrates the benefits of automation and highlights OneLab capabilities and best practices to promote solution adoption, helping transition from manual to a more automated approach. It can be used alone or serves as a building block for a more complex workflow and is easily adaptable to users' requirements.

Published by
Waters Corporation
Version 1, 19 Nov 2025 at 7:54 AM
Bottom-up proteomics is a useful approach for the discovery of signature peptides to identify specific proteins found in the complex food matrix.
Here we present a fully automated sample preparation protocol for protein digestion using the ProteinWorks™ kit, and the final mixture obtained will be ready for a typical LCMS method.
Get in touch with an expert about running this protocol on Andrew+.
Please note that this is a “Tutorial Method”
This basic method provides the core methodology for translating a workflow into OneLab-executable script(s) as an attempt to fully or semi-automate a specific procedure. It demonstrates the benefits of automation and highlights OneLab capabilities and best practices to promote solution adoption, helping transition from manual to a more automated approach. It can be used alone or serves as a building block for a more complex workflow and is easily adaptable to users' requirements.
Overview
Protocols
1

Automated Protein Digestion in Milk using ProteinWorks kit (6 samples)
Contact info

Published by
Waters Corporation
From the everyday consumer to scientists in the laboratory, we all rely on accurate information to make critical decisions. Waters Corporation is the world's leading specialty measurement company focused on improving human health and well-being through the application of high-value analytical technologies and industry leading scientific expertise.
This is an open access protocol distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. 